HBV Target gene Detail Information

> GREB1L Gene Search Result


Gene Information
Gene Name GREB1L
Gene ID 80000
Gene Full Name GREB1 like retinoic acid receptor coactivator
Gene Alias RHDA3; C18orf6; KIAA1772
Transcripts ENSG00000141449
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9C091
HGNC ID HGNC:31042
VEGA ID OTTHUMG00000178892
OMIM ID 617782
String ID 9606.ENSP00000464162
PharmGKB ID PA165429012
Target gene [GREB1L] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006610 chr18 27 8 1 36 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GREB1L expression and immune infiltrating cell level correlation result in HBV+ samples
GREB1L expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).