HBV Target gene Detail Information

> GRAMD1C Gene Search Result

Gene Information

Gene Name	GRAMD1C
Gene ID	54762
Gene Full Name	GRAM domain containing 1C
Transcripts	ENSG00000178075
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8IYS0
HGNC ID	HGNC:25252
VEGA ID	OTTHUMG00000159340
String ID	9606.ENSP00000350881
PharmGKB ID	PA142671709

Target gene [GRAMD1C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1000836	chr3	203	870	298	1371	View
1003526	chr3	105	10	13	128	View
1006953	chr3	31	1		32	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of GRAMD1C expression and immune infiltrating cell level correlation result in HBV+ samples
GRAMD1C expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).