HIV Target gene Detail Information

> GPCPD1 Gene Search Result

Gene Information

Gene Name	GPCPD1
Gene ID	56261
Gene Full Name	glycerophosphocholine phosphodiesterase 1
Gene Alias	EDI3; GDE5; GDPD6; PREI4
Transcripts	ENSG00000125772
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q9NPB8
HGNC ID	HGNC:26957
VEGA ID	OTTHUMG00000031806
OMIM ID	614124
String ID	9606.ENSP00000368305
PharmGKB ID	PA165392351

Target gene [GPCPD1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000353	chr20	69	281	172	522	View
4004270	chr20	16	28	2	46	View
4006754	chr20	2	10	11	23	View
4007457	chr20	15	4		19	View
4009389	chr20	3	6	3	12	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of GPCPD1 expression and immune infiltrating cell level correlation result in HIV+ samples
GPCPD1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).