HBV Target gene Detail Information

> GPATCH8 Gene Search Result

Gene Information

Gene Name	GPATCH8
Gene ID	23131
Gene Full Name	G-patch domain containing 8
Gene Alias	GPATC8; KIAA0553
Transcripts	ENSG00000186566
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Mitochondria;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9UKJ3
HGNC ID	HGNC:29066
VEGA ID	OTTHUMG00000181818
OMIM ID	614396
String ID	9606.ENSP00000467556
PharmGKB ID	PA162390105

Target gene [GPATCH8] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1006538	chr17	29	8		37	View
1007158	chr17	24	6		30	View
1016727	chr17	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of GPATCH8 expression and immune infiltrating cell level correlation result in HBV+ samples
GPATCH8 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).