HIV Target gene Detail Information

> GPATCH2L Gene Search Result

Gene Information

Gene Name	GPATCH2L
Gene ID	55668
Gene Full Name	G-patch domain containing 2 like
Gene Alias	C14orf118
Transcripts	ENSG00000089916
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9NWQ4
HGNC ID	HGNC:20210
VEGA ID	OTTHUMG00000171490
String ID	9606.ENSP00000261530
PharmGKB ID	PA134963976

Target gene [GPATCH2L] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4011418	chr14	3	3	1	7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of GPATCH2L expression and immune infiltrating cell level correlation result in HIV+ samples
GPATCH2L expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).