HIV Target gene Detail Information

> GPATCH1 Gene Search Result

Gene Information

Gene Name	GPATCH1
Gene ID	55094
Gene Full Name	G-patch domain containing 1
Gene Alias	ECGP; GPATC1
Transcripts	ENSG00000076650
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cell Junctions;Nucleoplasm;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9BRR8
HGNC ID	HGNC:24658
VEGA ID	OTTHUMG00000180341
String ID	9606.ENSP00000170564
PharmGKB ID	PA162390063

Target gene [GPATCH1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007911	chr19	8	9		17	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of GPATCH1 expression and immune infiltrating cell level correlation result in HIV+ samples
GPATCH1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).