HTLV1 Target gene Detail Information

> GOLM1 Gene Search Result


Gene Information
Gene Name GOLM1
Gene ID 51280
Gene Full Name golgi membrane protein 1
Gene Alias GP73; HEL46; GOLPH2; C9orf155; PSEC0257; bA379P1.3
Transcripts ENSG00000135052
Virus HTLV1
Gene Type protein coding
HPA Location Info Golgi apparatus;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q8NBJ4
HGNC ID HGNC:15451
VEGA ID OTTHUMG00000020130
OMIM ID 606804
String ID 9606.ENSP00000373364
PharmGKB ID PA28811
Target gene [GOLM1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010421 chr9 13 13 5 31 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of GOLM1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
GOLM1 expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of GOLM1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
GOLM1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).