HBV Target gene Detail Information

> GNG4 Gene Search Result


Gene Information
Gene Name GNG4
Gene ID 2786
Gene Full Name G protein subunit gamma 4
Transcripts ENSG00000282972
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, RAS pathway related proteins
Uniport_ID P50150
HGNC ID HGNC:4407
VEGA ID OTTHUMG00000040740
OMIM ID 604388
String ID 9606.ENSP00000375727
PharmGKB ID PA28786
Target gene [GNG4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1400459 chr1 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GNG4 expression and immune infiltrating cell level correlation result in HBV+ samples
GNG4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).