HIV Target gene Detail Information

> GNB1L Gene Search Result

Gene Information

Gene Name	GNB1L
Gene ID	54584
Gene Full Name	G protein subunit beta 1 like
Gene Alias	GY2; FKSG1; WDR14; WDVCF; DGCRK3
Transcripts	ENSG00000185838
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9BYB4
HGNC ID	HGNC:4397
VEGA ID	OTTHUMG00000150279
OMIM ID	610778
String ID	9606.ENSP00000331313
PharmGKB ID	PA28777

Target gene [GNB1L] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000956	chr22	63	105	72	240	View
4005186	chr22	6	23	6	35	View
4006929	chr22	11	6	5	22	View
4010378	chr22	9			9	View
4011324	chr22	7			7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of GNB1L expression and immune infiltrating cell level correlation result in HIV+ samples
GNB1L expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).