HBV Target gene Detail Information

> GLRA3 Gene Search Result


Gene Information
Gene Name GLRA3
Gene ID 8001
Gene Full Name glycine receptor alpha 3
Transcripts ENSG00000145451
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info FDA approved drug targets, Predicted membrane proteins, Transporters
Uniport_ID O75311
HGNC ID HGNC:4328
VEGA ID OTTHUMG00000149816
OMIM ID 600421
String ID 9606.ENSP00000274093
Drugbank ID BE0000414; BE0009666
PharmGKB ID PA28729
Target gene [GLRA3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015528 chr4 2 2 View
1015565 chr4 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GLRA3 expression and immune infiltrating cell level correlation result in HBV+ samples
GLRA3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).