HBV Target gene Detail Information

> GLI3 Gene Search Result


Gene Information
Gene Name GLI3
Gene ID 2737
Gene Full Name GLI family zinc finger 3
Gene Alias PHS; ACLS; GCPS; PAPA; PAPB; PAP-A; PAPA1; PPDIV; GLI3FL; GLI3-190
Transcripts ENSG00000106571
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Nucleoli;Vesicles;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Transcription factors
Gene Function Oncogene
Uniport_ID P10071
HGNC ID HGNC:4319
VEGA ID OTTHUMG00000023630
OMIM ID 165240
String ID 9606.ENSP00000379258
PharmGKB ID PA28722
Target gene [GLI3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005645 chr7 6 30 14 50 View
1016078 chr7 2 2 View
1400310 chr7 12 1 4 17 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of GLI3 expression and immune infiltrating cell level correlation result in HBV+ samples
GLI3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).