HIV Target gene Detail Information

> GLCCI1 Gene Search Result

Gene Information

Gene Name	GLCCI1
Gene ID	113263
Gene Full Name	glucocorticoid induced 1
Gene Alias	GCTR; GIG18; TSSN1; FAM117C
Transcripts	ENSG00000106415
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q86VQ1
HGNC ID	HGNC:18713
VEGA ID	OTTHUMG00000151984
OMIM ID	614283
String ID	9606.ENSP00000223145
PharmGKB ID	PA38657

Target gene [GLCCI1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000455	chr7	237	88	145	470	View
4007631	chr7	18			18	View
4010902	chr7	2	6		8	View
4013222	chr7	3	1		4	View
4013494	chr7		3		3	View
4013535	chr7	2	1		3	View
4016670	chr7				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of GLCCI1 expression and immune infiltrating cell level correlation result in HIV+ samples
GLCCI1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of GLCCI1 expression and immune infiltrating cell level correlation result in HIV+ samples
GLCCI1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).