HBV Target gene Detail Information

> GIPC2 Gene Search Result

Gene Information

Gene Name	GIPC2
Gene ID	54810
Gene Full Name	GIPC PDZ domain containing family member 2
Gene Alias	SEMCAP2; SEMCAP-2
Transcripts	ENSG00000137960
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8TF65
HGNC ID	HGNC:18177
VEGA ID	OTTHUMG00000041145
OMIM ID	619089
String ID	9606.ENSP00000359795
PharmGKB ID	PA142671735

Target gene [GIPC2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1007019	chr1	16	15		31	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of GIPC2 expression and immune infiltrating cell level correlation result in HBV+ samples
GIPC2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).