HIV Target gene Detail Information

> GIPC1 Gene Search Result

Gene Information

Gene Name	GIPC1
Gene ID	10755
Gene Full Name	GIPC PDZ domain containing family member 1
Gene Alias	NIP; GIPC; IIP-1; TIP-2; SEMCAP; C19orf3; Hs.6454; GLUT1CBP; RGS19IP1; SYNECTIN; SYNECTIIN
Transcripts	ENSG00000123159
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cell Junctions;Plasma membrane;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	O14908
HGNC ID	HGNC:1226
VEGA ID	OTTHUMG00000182248
OMIM ID	605072
String ID	9606.ENSP00000376753
PharmGKB ID	PA34371

Target gene [GIPC1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009671	chr19	11			11	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of GIPC1 expression and immune infiltrating cell level correlation result in HIV+ samples
GIPC1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of GIPC1 expression and immune infiltrating cell level correlation result in HIV+ samples
GIPC1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).