HIV Target gene Detail Information

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Gene Information
Gene Name GEN1
Gene ID 348654
Gene Full Name GEN1, Holliday junction 5' flap endonuclease
Gene Alias Gen
Transcripts ENSG00000178295
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q17RS7
HGNC ID HGNC:26881
VEGA ID OTTHUMG00000121173
OMIM ID 612449
String ID 9606.ENSP00000318977
PharmGKB ID PA162389359
Target gene [GEN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4010307 chr2 7 2 9 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).