HTLV1 Target gene Detail Information

> GCFC2 Gene Search Result


Gene Information
Gene Name GCFC2
Gene ID 6936
Gene Full Name GC-rich sequence DNA-binding factor 2
Gene Alias GCF; TCF9; DNABF; C2orf3
Transcripts ENSG00000005436
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P16383
HGNC ID HGNC:1317
VEGA ID OTTHUMG00000129989
OMIM ID 189901
String ID 9606.ENSP00000318690
PharmGKB ID PA25892
Target gene [GCFC2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6023608 chr2 4 4 View
6026346 chr2 2 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).