HBV Target gene Detail Information

> GATM Gene Search Result

Gene Information

Gene Name	GATM
Gene ID	2628
Gene Full Name	glycine amidinotransferase
Gene Alias	AT; AGAT; CCDS3
Transcripts	ENSG00000171766
Virus	HBV
Gene Type	protein coding
HPA Location Info	Mitochondria;
HPA Protein Class Info	Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID	P50440
HGNC ID	HGNC:4175
VEGA ID	OTTHUMG00000131427
OMIM ID	602360
String ID	9606.ENSP00000379895
Drugbank ID	BE0000347
PharmGKB ID	PA28590

Target gene [GATM] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1004531	chr15	27	42	9	78	View
1008117	chr15	18	4		22	View
1008118	chr15	18	4		22	View
1011172	chr15	4	1	5	10	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of GATM expression and immune infiltrating cell level correlation result in HBV+ samples
GATM expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).