HIV Target gene Detail Information

> GARNL3 Gene Search Result


Gene Information
Gene Name GARNL3
Gene ID 84253
Gene Full Name GTPase activating Rap/RanGAP domain like 3
Gene Alias bA356B19.1
Transcripts ENSG00000136895
Virus HIV
Gene Type protein coding
HPA Location Info Vesicles;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5VVW2
HGNC ID HGNC:25425
VEGA ID OTTHUMG00000020700
String ID 9606.ENSP00000362485
PharmGKB ID PA134861523
Target gene [GARNL3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4010995 chr9 1 6 7 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).