HTLV1 Target gene Detail Information

> GABPB1 Gene Search Result

Gene Information

Gene Name	GABPB1
Gene ID	2553
Gene Full Name	GA binding protein transcription factor subunit beta 1
Gene Alias	E4TF1; GABPB; BABPB2; E4TF1B; GABPB2; NRF2B1; NRF2B2; GABPB-1; E4TF1-47; E4TF1-53
Transcripts	ENSG00000104064
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytoplasmic bodies;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q06547
HGNC ID	HGNC:4074
VEGA ID	OTTHUMG00000131642
OMIM ID	600610
String ID	9606.ENSP00000220429
PharmGKB ID	PA162389163

Target gene [GABPB1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6029213	chr15	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of GABPB1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
GABPB1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).