HIV Target gene Detail Information

> FUNDC2 Gene Search Result


Gene Information
Gene Name FUNDC2
Gene ID 65991
Gene Full Name FUN14 domain containing 2
Gene Alias DC44; HCC3; HCBP6; PD03104
Transcripts ENSG00000165775
Virus HIV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9BWH2
HGNC ID HGNC:24925
VEGA ID OTTHUMG00000013504
OMIM ID 301042
String ID 9606.ENSP00000358510
PharmGKB ID PA134908797
Target gene [FUNDC2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002428 chrX 93 2 95 View
4006470 chrX 23 1 24 View
4013071 chrX 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of FUNDC2 expression and immune infiltrating cell level correlation result in HIV+ samples
FUNDC2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).