HIV Target gene Detail Information

> FUBP1 Gene Search Result

Gene Information

Gene Name	FUBP1
Gene ID	8880
Gene Full Name	far upstream element binding protein 1
Gene Alias	FBP; FUBP; hDH V
Transcripts	ENSG00000162613
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Gene Function	Oncogene
Uniport_ID	Q96AE4
HGNC ID	HGNC:4004
VEGA ID	OTTHUMG00000040799
OMIM ID	603444
String ID	9606.ENSP00000359804
Drugbank ID	BE0003422
PharmGKB ID	PA28420

Target gene [FUBP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007343	chr1	10	7	3	20	View
4010140	chr1	7	2		9	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FUBP1 expression and immune infiltrating cell level correlation result in HIV+ samples
FUBP1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of FUBP1 expression and immune infiltrating cell level correlation result in HIV+ samples
FUBP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).