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HBV Target gene Detail Information

> FSIP2 Gene Search Result


Gene Information
Gene Name FSIP2
Gene ID 401024
Gene Full Name fibrous sheath interacting protein 2
Gene Alias SPGF34
Transcripts ENSG00000188738
Virus HBV
Gene Type protein coding
HPA Location Info Microtubules;Mitochondria;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5CZC0
HGNC ID HGNC:21675
VEGA ID OTTHUMG00000153874
OMIM ID 615796
String ID 9606.ENSP00000344403
PharmGKB ID PA134991479
Target gene [FSIP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008632 chr2 13 1 6 20 View
1008633 chr2 20 20 View
1008748 chr2 13 1 5 19 View
1008749 chr2 13 1 5 19 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of FSIP2 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
FSIP2 expression: Low -> High
Lollipop of FSIP2 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of FSIP2 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).