HBV Target gene Detail Information

> FRK Gene Search Result


Gene Information
Gene Name FRK
Gene ID 2444
Gene Full Name fyn related Src family tyrosine kinase
Gene Alias GTK; RAK; PTK5
Transcripts ENSG00000111816
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Enzymes, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID P42685
HGNC ID HGNC:3955
VEGA ID OTTHUMG00000015424
OMIM ID 606573
String ID 9606.ENSP00000476145
Drugbank ID BE0004742
PharmGKB ID PA28373
Target gene [FRK] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005778 chr6 47 1 48 View
1006974 chr6 24 6 2 32 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FRK expression and immune infiltrating cell level correlation result in HBV+ samples
FRK expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).