HIV Target gene Detail Information

> FOXN2 Gene Search Result

Gene Information

Gene Name	FOXN2
Gene ID	3344
Gene Full Name	forkhead box N2
Gene Alias	HTLF
Transcripts	ENSG00000170802
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Vesicles;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	P32314
HGNC ID	HGNC:5281
VEGA ID	OTTHUMG00000129168
OMIM ID	143089
String ID	9606.ENSP00000343633
PharmGKB ID	PA162388822

Target gene [FOXN2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004081	chr2	42	3	4	49	View
4004306	chr2	46			46	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FOXN2 expression and immune infiltrating cell level correlation result in HIV+ samples
FOXN2 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of FOXN2 expression and immune infiltrating cell level correlation result in HIV+ samples
FOXN2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).