HBV Target gene Detail Information

> FOXA3 Gene Search Result


Gene Information
Gene Name FOXA3
Gene ID 3171
Gene Full Name forkhead box A3
Gene Alias FKHH3; HNF3G; TCF3G
Transcripts ENSG00000170608
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID P55318
HGNC ID HGNC:5023
VEGA ID OTTHUMG00000182484
OMIM ID 602295
String ID 9606.ENSP00000304004
PharmGKB ID PA201092
Target gene [FOXA3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010237 chr19 2 11 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FOXA3 expression and immune infiltrating cell level correlation result in HBV+ samples
FOXA3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).