HBV Target gene Detail Information

> FNDC3A Gene Search Result

Gene Information

Gene Name	FNDC3A
Gene ID	22862
Gene Full Name	fibronectin type III domain containing 3A
Gene Alias	HUGO; FNDC3; bA203I16.1; bA203I16.5
Transcripts	ENSG00000102531
Virus	HBV
Gene Type	protein coding
HPA Location Info	Centrosome;Golgi apparatus;Nucleoplasm;Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9Y2H6
HGNC ID	HGNC:20296
VEGA ID	OTTHUMG00000016911
OMIM ID	615794
String ID	9606.ENSP00000441831
PharmGKB ID	PA128394588

Target gene [FNDC3A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005696	chr13	47	2		49	View
1008429	chr13	18	2	1	21	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of FNDC3A expression and immune infiltrating cell level correlation result in HBV+ samples
FNDC3A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).