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HIV Target gene Detail Information

> FNBP1 Gene Search Result


Gene Information
Gene Name FNBP1
Gene ID 23048
Gene Full Name formin binding protein 1
Gene Alias FBP17
Transcripts ENSG00000187239
Virus HIV
Gene Type protein coding
HPA Location Info Plasma membrane;Vesicles;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q96RU3
HGNC ID HGNC:17069
VEGA ID OTTHUMG00000020800
OMIM ID 606191
String ID 9606.ENSP00000413625
PharmGKB ID PA128394597
Target gene [FNBP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000899 chr9 76 85 92 253 View
4000935 chr9 243 1 1 245 View
4001055 chr9 96 17 111 224 View
4001820 chr9 96 21 12 129 View
4002208 chr9 90 11 5 106 View
4002215 chr9 28 31 46 105 View
4002726 chr9 24 33 25 82 View
4002853 chr9 73 4 77 View
4002995 chr9 14 57 2 73 View
4003571 chr9 55 4 59 View
4003610 chr9 46 4 8 58 View
4004151 chr9 28 10 10 48 View
4004351 chr9 44 1 45 View
4004594 chr9 11 8 23 42 View
4005722 chr9 4 3 23 30 View
4005927 chr9 28 28 View
4006346 chr9 16 9 25 View
4006613 chr9 20 4 24 View
4006840 chr9 14 7 1 22 View
4007420 chr9 5 13 1 19 View
4008790 chr9 12 2 14 View
4008907 chr9 12 1 13 View
4009861 chr9 9 1 10 View
4010452 chr9 9 9 View
4010617 chr9 6 2 8 View
4010894 chr9 4 1 3 8 View
4011296 chr9 6 1 7 View
4011857 chr9 2 4 6 View
4011938 chr9 6 6 View
4012821 chr9 3 1 4 View
4013231 chr9 3 1 4 View
4014031 chr9 3 3 View
4014032 chr9 3 3 View
4014042 chr9 2 2 View
4014043 chr9 2 2 View
4014568 chr9 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of FNBP1 expression and immune infiltrating cell level correlation result in HIV+ samples
FNBP1 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of FNBP1 expression and immune infiltrating cell level correlation result in HIV+ samples
FNBP1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).