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HBV Target gene Detail Information

> FN1 Gene Search Result


Gene Information
Gene Name FN1
Gene ID 2335
Gene Full Name fibronectin 1
Gene Alias FN; CIG; FNZ; MSF; ED-B; FINC; GFND; LETS; GFND2; SMDCF
Transcripts ENSG00000115414
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Candidate cardiovascular disease genes, Disease related genes, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID P02751
HGNC ID HGNC:3778
VEGA ID OTTHUMG00000133054
OMIM ID 135600
String ID 9606.ENSP00000346839
Drugbank ID BE0001180
PharmGKB ID PA28194
Target gene [FN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000449 chr2 1628 392 229 2249 View
1001232 chr2 734 118 21 873 View
1001660 chr19 447 70 34 551 View
1001914 chr2 39 315 70 424 View
1001919 chr2 39 315 68 422 View
1002132 chr2 307 24 4 335 View
1002196 chr2 294 22 3 319 View
1002198 chr2 294 22 3 319 View
1002199 chr2 294 22 3 319 View
1002555 chr2 229 18 2 249 View
1002623 chr2 21 193 22 236 View
1002734 chr2 24 183 7 214 View
1002750 chr2 146 49 16 211 View
1002753 chr2 68 88 54 210 View
1002832 chr2 143 45 13 201 View
1002896 chr2 180 12 1 193 View
1002914 chr2 179 11 1 191 View
1002938 chr2 108 60 23 191 View
1003139 chr2 152 9 1 162 View
1003159 chr2 151 8 1 160 View
1003205 chr2 6 146 5 157 View
1003229 chr2 31 66 57 154 View
1003367 chr2 48 64 28 140 View
1003368 chr2 48 64 28 140 View
1003443 chr2 54 78 2 134 View
1003575 chr2 91 53 4 148 View
1003576 chr2 91 53 4 148 View
1003577 chr2 91 53 4 148 View
1003578 chr2 91 53 4 148 View
1003579 chr2 91 53 4 148 View
1003580 chr2 91 53 4 148 View
1003581 chr2 91 53 4 148 View
1003582 chr2 53 62 9 124 View
1003590 chr2 55 68 123 View
1003608 chr2 52 62 8 122 View
1003612 chr2 52 62 8 122 View
1003624 chr2 67 67 7 141 View
1003625 chr2 67 67 7 141 View
1003664 chr2 20 49 49 118 View
1003739 chr2 100 13 113 View
1003750 chr2 51 42 19 112 View
1003880 chr2 98 3 3 104 View
1003899 chr2 9 49 45 103 View
1003929 chr2 1 97 3 101 View
1004018 chr2 57 36 4 97 View
1004090 chr2 43 33 18 94 View
1004142 chr2 80 7 4 91 View
1004143 chr2 80 7 4 91 View
1004176 chr2 40 33 17 90 View
1004177 chr2 67 17 6 90 View
1004267 chr2 64 23 87 View
1004307 chr2 51 31 4 86 View
1004327 chr2 76 7 2 85 View
1004360 chr2 53 27 4 84 View
1004391 chr2 65 13 5 83 View
1004403 chr2 65 13 5 83 View
1004565 chr2 49 24 4 77 View
1004566 chr2 49 24 4 77 View
1004630 chr2 67 7 74 View
1004665 chr2 44 22 7 73 View
1004693 chr2 43 22 7 72 View
1004729 chr2 42 28 1 71 View
1004731 chr2 42 28 1 71 View
1004802 chr2 39 30 69 View
1004826 chr2 46 19 3 68 View
1004827 chr2 46 19 3 68 View
1005185 chr2 16 10 33 59 View
1005227 chr2 17 10 31 58 View
1005374 chr2 47 7 2 56 View
1005375 chr2 26 25 5 56 View
1005479 chr2 36 16 2 54 View
1005482 chr2 36 16 2 54 View
1005506 chr2 26 22 5 53 View
1005521 chr2 38 19 57 View
1005561 chr2 21 23 8 52 View
1005662 chr2 30 18 2 50 View
1005796 chr2 32 14 2 48 View
1005853 chr2 24 18 8 50 View
1006001 chr2 39 3 3 45 View
1006008 chr2 39 3 3 45 View
1006016 chr2 39 3 2 44 View
1006033 chr2 11 33 44 View
1006069 chr2 37 6 1 44 View
1006075 chr2 39 3 3 45 View
1006083 chr2 28 14 2 44 View
1006084 chr2 28 14 2 44 View
1006244 chr2 20 9 12 41 View
1006265 chr2 27 12 2 41 View
1006334 chr2 16 24 40 View
1006483 chr2 15 20 3 38 View
1006548 chr2 29 8 37 View
1006555 chr2 29 8 37 View
1006709 chr2 19 14 2 35 View
1006727 chr2 20 14 1 35 View
1006730 chr2 18 11 6 35 View
1006732 chr2 18 11 6 35 View
1006804 chr2 23 11 34 View
1006807 chr2 34 34 View
1007056 chr2 30 1 31 View
1007109 chr2 16 12 2 30 View
1007173 chr2 13 9 8 30 View
1007219 chr2 29 29 View
1007230 chr2 29 29 View
1007234 chr2 27 2 29 View
1007235 chr2 27 2 29 View
1007247 chr2 18 11 29 View
1007254 chr2 22 4 3 29 View
1007309 chr2 15 12 1 28 View
1007310 chr2 15 12 1 28 View
1007325 chr2 19 7 2 28 View
1007368 chr2 21 7 28 View
1007393 chr2 16 10 2 28 View
1007515 chr2 24 2 1 27 View
1007538 chr2 25 1 26 View
1007570 chr2 17 7 2 26 View
1007600 chr2 18 8 26 View
1007606 chr2 10 8 8 26 View
1007637 chr2 18 7 25 View
1007730 chr2 16 9 25 View
1007731 chr2 5 12 8 25 View
1007732 chr2 5 12 8 25 View
1007862 chr2 14 10 24 View
1007877 chr2 15 9 24 View
1007880 chr2 15 9 24 View
1007967 chr2 13 4 6 23 View
1007968 chr2 13 4 6 23 View
1008010 chr2 18 2 3 23 View
1008027 chr2 19 2 2 23 View
1008028 chr2 16 7 23 View
1008029 chr2 23 23 View
1008031 chr2 23 23 View
1008041 chr2 19 4 23 View
1008116 chr2 13 7 2 22 View
1008430 chr2 3 18 21 View
1008441 chr2 15 6 21 View
1008453 chr2 15 6 21 View
1008502 chr1 19 1 20 View
1008536 chr2 13 7 20 View
1008558 chr2 2 13 5 20 View
1008582 chr2 2 13 5 20 View
1008612 chr2 16 4 20 View
1008644 chr2 13 7 20 View
1008818 chr2 16 3 19 View
1008891 chr2 15 4 19 View
1008892 chr2 15 4 19 View
1009131 chr2 17 17 View
1009132 chr2 17 17 View
1009203 chr2 17 17 View
1009204 chr2 17 17 View
1009221 chr2 11 6 17 View
1009222 chr2 15 2 17 View
1009226 chr2 17 17 View
1009238 chr2 11 5 1 17 View
1009240 chr2 11 5 1 17 View
1009241 chr2 1 16 17 View
1009256 chr2 11 5 1 17 View
1009318 chr2 10 6 16 View
1009319 chr2 11 5 16 View
1009409 chr2 12 2 2 16 View
1009423 chr2 14 2 16 View
1009526 chr2 6 9 15 View
1009581 chr2 2 11 2 15 View
1009607 chr2 2 11 2 15 View
1009683 chr2 13 2 15 View
1009768 chr2 9 1 4 14 View
1009783 chr2 6 8 14 View
1009864 chr2 11 3 14 View
1009895 chr2 8 6 14 View
1009896 chr2 8 6 14 View
1009935 chr2 12 2 14 View
1009961 chr2 12 2 14 View
1010133 chr2 8 5 13 View
1010163 chr2 11 2 13 View
1010200 chr2 10 1 2 13 View
1010220 chr2 6 4 3 13 View
1010230 chr2 9 4 13 View
1010236 chr2 9 4 13 View
1010355 chr2 8 4 12 View
1010356 chr2 8 4 12 View
1010381 chr2 10 1 1 12 View
1010401 chr2 9 3 12 View
1010409 chr2 10 1 1 12 View
1010410 chr2 10 1 1 12 View
1010467 chr2 12 12 View
1010536 chr2 12 12 View
1010546 chr2 10 2 12 View
1010669 chr2 11 11 View
1010670 chr2 11 11 View
1010680 chr2 9 1 1 11 View
1010687 chr2 11 11 View
1010712 chr2 11 11 View
1010713 chr2 11 11 View
1010801 chr2 11 11 View
1010841 chr2 11 11 View
1011043 chr2 7 3 10 View
1011061 chr2 8 2 10 View
1011154 chr2 9 1 10 View
1011223 chr2 7 3 10 View
1011356 chr2 6 3 9 View
1011357 chr2 6 3 9 View
1011395 chr2 4 5 9 View
1011400 chr2 3 6 9 View
1011404 chr2 6 3 9 View
1011405 chr2 6 3 9 View
1011414 chr2 9 9 View
1011530 chr2 6 3 9 View
1011541 chr2 6 3 9 View
1011570 chr2 6 3 9 View
1011826 chr2 6 2 8 View
1011968 chr2 6 2 8 View
1012149 chr2 4 3 7 View
1012263 chr2 7 7 View
1012387 chr2 1 6 7 View
1012419 chr2 7 7 View
1012454 chr2 7 7 View
1012472 chr2 4 3 7 View
1012602 chr2 6 6 View
1012604 chr2 4 2 6 View
1012620 chr2 5 1 6 View
1012621 chr2 5 1 6 View
1012634 chr2 5 1 6 View
1012635 chr2 5 1 6 View
1012792 chr2 5 1 6 View
1012793 chr2 5 1 6 View
1012862 chr2 4 2 6 View
1013018 chr2 4 2 6 View
1013019 chr2 4 2 6 View
1013166 chr2 2 3 5 View
1013200 chr2 3 2 5 View
1013207 chr2 5 5 View
1013208 chr2 5 5 View
1013209 chr2 5 5 View
1013464 chr2 3 2 5 View
1013465 chr2 3 2 5 View
1013541 chr2 2 3 5 View
1013614 chr2 1 1 3 5 View
1013724 chr2 3 1 4 View
1013803 chr2 2 2 4 View
1013804 chr2 3 1 4 View
1013817 chr2 1 3 4 View
1013977 chr2 1 3 4 View
1014037 chr2 2 1 1 4 View
1014038 chr2 2 1 1 4 View
1014136 chr2 4 4 View
1014250 chr2 1 3 4 View
1014528 chr2 3 3 View
1014723 chr2 3 3 View
1014724 chr2 3 3 View
1014748 chr2 1 2 3 View
1014764 chr2 3 3 View
1014765 chr2 3 3 View
1014915 chr2 3 3 View
1015067 chr2 2 1 3 View
1015109 chr2 3 3 View
1015389 chr2 2 2 View
1015391 chr2 2 2 View
1015432 chr2 1 1 2 View
1015433 chr2 1 1 2 View
1015448 chr2 2 2 View
1015449 chr2 2 2 View
1015488 chr2 2 2 View
1015489 chr2 2 2 View
1015581 chr2 2 2 View
1015608 chr2 2 2 View
1015609 chr2 2 2 View
1015629 chr2 2 2 View
1015630 chr2 2 2 View
1015878 chr2 2 2 View
1015972 chr2 2 2 View
1015984 chr2 1 1 2 View
1016453 chr2 1 1 View
1016455 chr2 1 1 View
1016490 chr2 1 1 View
1016542 chr2 1 1 View
1016543 chr2 1 1 View
1016548 chr2 1 1 View
1016549 chr2 1 1 View
1017255 chr2 1 1 View
1017354 chr2 1 1 View
1017359 chr2 1 1 View
1017389 chr2 1 1 View
1017390 chr2 1 1 View
1017476 chr2 1 1 View
1018061 chr2 0 View
1400231 chr2 1 3 4 View
1401551 chr1 19 1 20 View
1403268 chr2 31 66 57 154 View
1403344 chr2 3 1 4 View
1404104 chr2 18 3 21 View
1404105 chr2 4 2 6 View
1404139 chr2 15 4 19 View
1404150 chr2 14 1 15 View
1404293 chr2 10 10 View
1404309 chr2 11 6 17 View
1404331 chr2 5 5 10 View
1404375 chr2 9 3 12 View
1404431 chr2 5 6 11 View
1404485 chr2 5 5 View
1404508 chr2 360 32 9 401 View
1404575 chr2 1424 2203 927 4554 View
1404591 chr2 3 1 67 71 View
1404681 chr2 2 2 View
1404923 chr2 22 1 1 24 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of FN1 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
FN1 expression: Low -> High
Lollipop of FN1 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of FN1 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FN1 expression and immune infiltrating cell level correlation result in HBV+ samples
FN1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).