HBV Target gene Detail Information

> FMNL2 Gene Search Result


Gene Information
Gene Name FMNL2
Gene ID 114793
Gene Full Name formin like 2
Gene Alias FHOD2
Transcripts ENSG00000157827
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Golgi apparatus;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96PY5
HGNC ID HGNC:18267
VEGA ID OTTHUMG00000154035
OMIM ID 616285
String ID 9606.ENSP00000288670
PharmGKB ID PA28144
Target gene [FMNL2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002765 chr2 10 73 125 208 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FMNL2 expression and immune infiltrating cell level correlation result in HBV+ samples
FMNL2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).