HPV Target gene Detail Information

> FLJ20021 Gene Search Result

Gene Information

Gene Name	FLJ20021
Gene ID	90024
Gene Full Name	uncharacterized LOC90024
Transcripts	ENSG00000254531
Virus	HPV
Gene Type	ncRNA
HPA Location Info

Target gene [FLJ20021] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5402557	chr4	4	12	2	18	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE65858 (GEO)	Head and neck squamous cell carcinoma	270	Head and neck squamous cell carcinoma (EBV+)(73), Head and neck squamous cell carcinoma (EBV-)(197)
GSE138080 (GEO)	Cervical intraepithelial neoplasia	25	Normal (10), Cervical intraepithelial neoplasia (HPV+)(15)

> Dataset: GSE65858
HeatMap of cell type fractions in all samples	Lollipop of FLJ20021 expression and immune infiltrating cell level correlation result in HPV+ samples
FLJ20021 expression: Low -> High

> Dataset: GSE138080
HeatMap of cell type fractions in all samples	Lollipop of FLJ20021 expression and immune infiltrating cell level correlation result in HPV+ samples
FLJ20021 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).