HBV Target gene Detail Information

> FGGY Gene Search Result


Gene Information
Gene Name FGGY
Gene ID 55277
Gene Full Name FGGY carbohydrate kinase domain containing
Transcripts ENSG00000172456
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear bodies;Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q96C11
HGNC ID HGNC:25610
VEGA ID OTTHUMG00000008424
OMIM ID 611370
String ID 9606.ENSP00000360262
PharmGKB ID PA162388453
Target gene [FGGY] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001313 chr1 570 98 119 787 View
1001500 chr1 491 79 89 659 View
1003458 chr1 130 2 132 View
1006086 chr1 9 25 10 44 View
1010846 chr1 4 5 2 11 View
1010873 chr1 4 5 2 11 View
1401720 chr1 570 98 119 787 View
1401721 chr1 491 79 89 659 View
1403116 chr1 130 2 132 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FGGY expression and immune infiltrating cell level correlation result in HBV+ samples
FGGY expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).