HBV Target gene Detail Information

> FGF13 Gene Search Result


Gene Information
Gene Name FGF13
Gene ID 2258
Gene Full Name fibroblast growth factor 13
Gene Alias FGF2; FHF2; FHF-2; FGF-13
Transcripts ENSG00000129682
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q92913
HGNC ID HGNC:3670
VEGA ID OTTHUMG00000022532
OMIM ID 300070
String ID 9606.ENSP00000322390
PharmGKB ID PA28109
Target gene [FGF13] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015995 chrX 1 1 2 View
1016837 chrX 1 1 View
1404937 chrX 2 5 7 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FGF13 expression and immune infiltrating cell level correlation result in HBV+ samples
FGF13 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).