HIV Target gene Detail Information

> FERMT3 Gene Search Result

Gene Information

Gene Name	FERMT3
Gene ID	83706
Gene Full Name	fermitin family member 3
Gene Alias	URP2; KIND3; MIG-2; MIG2B; URP2SF; UNC112C
Transcripts	ENSG00000149781
Virus	HIV
Gene Type	protein coding
HPA Location Info	Vesicles;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q86UX7
HGNC ID	HGNC:23151
VEGA ID	OTTHUMG00000167790
OMIM ID	607901
String ID	9606.ENSP00000279227
PharmGKB ID	PA162388384

Target gene [FERMT3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001391	chr11	163	6	1	170	View
4006058	chr11	17	10		27	View
4009726	chr11	4	6	1	11	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FERMT3 expression and immune infiltrating cell level correlation result in HIV+ samples
FERMT3 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of FERMT3 expression and immune infiltrating cell level correlation result in HIV+ samples
FERMT3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).