HIV Target gene Detail Information

> FCHSD2 Gene Search Result

Gene Information

Gene Name	FCHSD2
Gene ID	9873
Gene Full Name	FCH and double SH3 domains 2
Gene Alias	NWK; SH3MD3
Transcripts	ENSG00000137478
Virus	HIV
Gene Type	protein coding
HPA Location Info	Plasma membrane;Actin filaments;Focal adhesion sites;Nuclear speckles;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	O94868
HGNC ID	HGNC:29114
VEGA ID	OTTHUMG00000153082
OMIM ID	617556
String ID	9606.ENSP00000386722
PharmGKB ID	PA128394562

Target gene [FCHSD2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000260	chr11	516	83	29	628	View
4001157	chr11	143	60	1	204	View
4001484	chr11	111	19	29	159	View
4001745	chr11	32	7	96	135	View
4002553	chr11	13	74	2	89	View
4002627	chr11	24	13	49	86	View
4004254	chr11	26	20	1	47	View
4004695	chr11	32	2	6	40	View
4004945	chr11	33	4		37	View
4005159	chr11	20	14	1	35	View
4005351	chr11	7	2	24	33	View
4005515	chr11	29	3		32	View
4005661	chr11	12	1	17	30	View
4006506	chr11	23	1		24	View
4006777	chr11	21	2		23	View
4006794	chr11	17	5		22	View
4007396	chr11	15		4	19	View
4007397	chr11	13	6		19	View
4007725	chr11	18			18	View
4007941	chr11	16	1		17	View
4009065	chr11	5	8		13	View
4009129	chr11	9	3		12	View
4009366	chr11	10		2	12	View
4009399	chr11	3	8		11	View
4010547	chr11	6	1	1	8	View
4011179	chr11	1	3	3	7	View
4012391	chr11	4	1		5	View
4012864	chr11	3	1		4	View
4012865	chr11	4			4	View
4013567	chr11	1	1	1	3	View
4013842	chr11	3			3	View
4013843	chr11	1	2		3	View
4016073	chr11				0	View
4016173	chr11				0	View
4016174	chr11				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).