HBV Target gene Detail Information

> FBXO16 Gene Search Result


Gene Information
Gene Name FBXO16
Gene ID 157574
Gene Full Name F-box protein 16
Gene Alias FBX16
Transcripts ENSG00000214050
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;Plasma membrane;Vesicles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8IX29
HGNC ID HGNC:13618
VEGA ID OTTHUMG00000102147
OMIM ID 608519
String ID 9606.ENSP00000369604
PharmGKB ID PA134901223
Target gene [FBXO16] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013279 chr8 5 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FBXO16 expression and immune infiltrating cell level correlation result in HBV+ samples
FBXO16 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).