HIV Target gene Detail Information

> FANCB Gene Search Result

Gene Information

Gene Name	FANCB
Gene ID	2187
Gene Full Name	FA complementation group B
Gene Alias	FA2; FAB; FACB; FAAP90; FAAP95
Transcripts	ENSG00000181544
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q8NB91
HGNC ID	HGNC:3583
VEGA ID	OTTHUMG00000021168
OMIM ID	300515
String ID	9606.ENSP00000381378
PharmGKB ID	PA27996

Target gene [FANCB] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4016443	chrX				0	View
4016444	chrX				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FANCB expression and immune infiltrating cell level correlation result in HIV+ samples
FANCB expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of FANCB expression and immune infiltrating cell level correlation result in HIV+ samples
FANCB expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).