HPV Target gene Detail Information

> FAM78B Gene Search Result


Gene Information
Gene Name FAM78B
Gene ID 149297
Gene Full Name family with sequence similarity 78 member B
Transcripts ENSG00000188859
Virus HPV
Gene Type protein coding
HPA Location Info Golgi apparatus;Vesicles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5VT40
HGNC ID HGNC:13495
VEGA ID OTTHUMG00000034705
String ID 9606.ENSP00000339681
PharmGKB ID PA142671841
Target gene [FAM78B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5403931 chr1 33 2 35 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).