HBV Target gene Detail Information

> FAM71F1 Gene Search Result

Gene Information

Gene Name	FAM71F1
Gene ID	84691
Gene Full Name	family with sequence similarity 71 member F1
Gene Alias	FAM137A; NYD-SP18
Transcripts	ENSG00000135248
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q96KD3
HGNC ID	HGNC:30704
VEGA ID	OTTHUMG00000158276
String ID	9606.ENSP00000326652
PharmGKB ID	PA162387797

Target gene [FAM71F1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1004612	chr7	25	39	11	75	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of FAM71F1 expression and immune infiltrating cell level correlation result in HBV+ samples
FAM71F1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).