HTLV1 Target gene Detail Information

> FAM47E Gene Search Result

Gene Information

Gene Name	FAM47E
Gene ID	100129583
Gene Full Name	family with sequence similarity 47 member E
Transcripts	ENSG00000189157
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q6ZV65
HGNC ID	HGNC:34343
VEGA ID	OTTHUMG00000185390
String ID	9606.ENSP00000409423
PharmGKB ID	PA162387656

Target gene [FAM47E] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6006812	chr4	21	37	5	63	View
6007604	chr4	29	19	5	53	View
6010368	chr4	25	5	1	31	View
6028569	chr4		1		1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of FAM47E expression and immune infiltrating cell level correlation result in HTLV1+ samples
FAM47E expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).