HPV Target gene Detail Information

> FAM47B Gene Search Result


Gene Information
Gene Name FAM47B
Gene ID 170062
Gene Full Name family with sequence similarity 47 member B
Transcripts ENSG00000189132
Virus HPV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8NA70
HGNC ID HGNC:26659
VEGA ID OTTHUMG00000021345
String ID 9606.ENSP00000328307
PharmGKB ID PA134969396
Target gene [FAM47B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200901 chrX 2 2 View
5201421 chrX 2 11 13 View
5402534 chrX 3 1 4 View
5402535 chrX 25 4 29 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).