HBV Target gene Detail Information

> FAM3B Gene Search Result


Gene Information
Gene Name FAM3B
Gene ID 54097
Gene Full Name family with sequence similarity 3 member B
Gene Alias 2-21; ORF9; PANDER; PRED44; C21orf11; C21orf76
Transcripts ENSG00000183844
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;Predicted to be secreted;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID P58499
HGNC ID HGNC:1253
VEGA ID OTTHUMG00000086752
OMIM ID 608617
String ID 9606.ENSP00000350673
PharmGKB ID PA27979
Target gene [FAM3B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008771 chr21 18 1 19 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FAM3B expression and immune infiltrating cell level correlation result in HBV+ samples
FAM3B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).