HPV Target gene Detail Information

> FAM27E2 Gene Search Result


Gene Information
Gene Name FAM27E2
Gene ID 100289124
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:32013
PharmGKB ID PA145148933
Target gene [FAM27E2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5404294 chr9 6 128 1 135 View
5404295 chr9 8 134 1 143 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of FAM27E2 expression and immune infiltrating cell level correlation result in HPV+ samples
FAM27E2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).