HPV Target gene Detail Information

> FAM228A Gene Search Result

Gene Information

Gene Name	FAM228A
Gene ID	653140
Gene Full Name	family with sequence similarity 228 member A
Gene Alias	C2orf84
Transcripts	ENSG00000186453
Virus	HPV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q86W67
HGNC ID	HGNC:34418
VEGA ID	OTTHUMG00000151903
String ID	9606.ENSP00000295150
PharmGKB ID	PA164717160

Target gene [FAM228A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001360	chr2	13	20	4	37	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of FAM228A expression and immune infiltrating cell level correlation result in HPV+ samples
FAM228A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).