HIV Target gene Detail Information

> FAM189A1 Gene Search Result


Gene Information
Gene Name FAM189A1
Gene ID 23359
Gene Full Name family with sequence similarity 189 member A1
Gene Alias TMEM228
Transcripts ENSG00000273564
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID O60320
HGNC ID HGNC:29075
VEGA ID OTTHUMG00000191394
String ID 9606.ENSP00000261275
PharmGKB ID PA165478574
Target gene [FAM189A1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003798 chr15 24 18 12 54 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).