HIV Target gene Detail Information

> FAM187B Gene Search Result

Gene Information

Gene Name	FAM187B
Gene ID	148109
Gene Full Name	family with sequence similarity 187 member B
Gene Alias	TMEM162
Transcripts	ENSG00000177558
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q17R55
HGNC ID	HGNC:26366
VEGA ID	OTTHUMG00000164450
String ID	9606.ENSP00000323355
PharmGKB ID	PA164719910

Target gene [FAM187B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005250	chr19	11	23		34	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FAM187B expression and immune infiltrating cell level correlation result in HIV+ samples
FAM187B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).