HPV Target gene Detail Information

> FAM178B Gene Search Result


Gene Information
Gene Name FAM178B
Gene ID 51252
Gene Full Name family with sequence similarity 178 member B
Transcripts ENSG00000168754
Virus HPV
Gene Type protein coding
HPA Location Info Nuclear speckles;Golgi apparatus;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8IXR5
HGNC ID HGNC:28036
VEGA ID OTTHUMG00000155257
String ID 9606.ENSP00000429896
PharmGKB ID PA162387456
Target gene [FAM178B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5404134 chr2 669 137 25 831 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).