HTLV1 Target gene Detail Information

> FAM163B Gene Search Result

Gene Information

Gene Name	FAM163B
Gene ID	642968
Gene Full Name	family with sequence similarity 163 member B
Gene Alias	C9orf166
Transcripts	ENSG00000196990
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;Nuclear bodies;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	P0C2L3
HGNC ID	HGNC:33277
VEGA ID	OTTHUMG00000159557
String ID	9606.ENSP00000349336
PharmGKB ID	PA162386945

Target gene [FAM163B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6008916	chr9	20	15	5	40	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of FAM163B expression and immune infiltrating cell level correlation result in HTLV1+ samples
FAM163B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).