HIV Target gene Detail Information

> FAM162B Gene Search Result

Gene Information

Gene Name	FAM162B
Gene ID	221303
Gene Full Name	family with sequence similarity 162 member B
Gene Alias	C6orf189; bA86F4.2
Transcripts	ENSG00000183807
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q5T6X4
HGNC ID	HGNC:21549
VEGA ID	OTTHUMG00000015446
String ID	9606.ENSP00000357545
PharmGKB ID	PA162386931

Target gene [FAM162B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4014076	chr6	1	1		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FAM162B expression and immune infiltrating cell level correlation result in HIV+ samples
FAM162B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).