HBV Target gene Detail Information

> FAM160B1 Gene Search Result


Gene Information
Gene Name FAM160B1
Gene ID 57700
Gene Full Name family with sequence similarity 160 member B1
Gene Alias KIAA1600; bA106M7.3
Transcripts ENSG00000151553
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear speckles;Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5W0V3
VEGA ID OTTHUMG00000019092
OMIM ID 617312
String ID 9606.ENSP00000358251
PharmGKB ID PA162386798
Target gene [FAM160B1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004231 chr10 65 21 3 89 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FAM160B1 expression and immune infiltrating cell level correlation result in HBV+ samples
FAM160B1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).