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HBV Target gene Detail Information

> FAM157A Gene Search Result


Gene Information
Gene Name FAM157A
Gene ID 728262
Gene Alias GTF2IP18
Transcripts ENSG00000236438
Virus HBV
Gene Type ncRNA
HPA Location Info
HGNC ID HGNC:34079
VEGA ID OTTHUMG00000189844
PharmGKB ID PA164719690
Target gene [FAM157A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000554 chr3 53 1058 793 1904 View
1002232 chr3 67 187 56 310 View
1002237 chr3 68 184 56 308 View
1002244 chr3 68 183 57 308 View
1002335 chr3 65 172 55 292 View
1002355 chr3 45 165 77 287 View
1002356 chr3 45 165 77 287 View
1002358 chr3 45 165 77 287 View
1002360 chr3 45 165 77 287 View
1002365 chr3 27 242 17 286 View
1002404 chr3 41 162 76 279 View
1002480 chr3 87 124 56 267 View
1002481 chr3 87 125 55 267 View
1002482 chr3 37 156 74 267 View
1002498 chr3 91 124 49 264 View
1002511 chr3 84 125 50 259 View
1002514 chr3 84 119 55 258 View
1002547 chr3 84 124 42 250 View
1002573 chr3 30 138 77 245 View
1002636 chr3 78 103 53 234 View
1003255 chr3 28 115 9 152 View
1008703 chr3 11 8 19 View
1009742 chr3 8 6 14 View
1400666 chr3 45 165 77 287 View
1401188 chr3 27 242 17 286 View
1401448 chr3 65 172 55 292 View
1401722 chr3 68 184 56 308 View
1401723 chr3 45 165 77 287 View
1401724 chr3 84 124 42 250 View
1401822 chr3 41 162 76 279 View
1403030 chr3 84 125 50 259 View
1403666 chr3 8 6 14 View
1403667 chr3 11 8 19 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FAM157A expression and immune infiltrating cell level correlation result in HBV+ samples
FAM157A expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).